Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWWV01006851.1 Corchorus capsularis cultivar CVL-1 contig06872, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 25677
ACGTcount: A:0.32, C:0.19, G:0.17, T:0.32
Found at i:2662 original size:37 final size:36
Alignment explanation
Indices: 2576--2792 Score: 260
Period size: 37 Copynumber: 5.9 Consensus size: 36
2566 CCAGTACCCC
2576 AATACACTAAGAGTCAAAATAATAGTAACCAGTAA-T
1 AATA-ACTAAGAGTCAAAATAATAGTAACCAGTAATT
*
2612 --TAACTAAGAGTCAAAATGATAGTAACCAGTAATT
1 AATAACTAAGAGTCAAAATAATAGTAACCAGTAATT
*
2646 AACTAACTAAGAGTCAAAATGATAGTAACCAGTAATT
1 AA-TAACTAAGAGTCAAAATAATAGTAACCAGTAATT
*
2683 AAGTAACTAAGAGTCAAAATGATAGTAACCAGTAATT
1 AA-TAACTAAGAGTCAAAATAATAGTAACCAGTAATT
* * * *
2720 AAGTAATTAAGAGTCAAAGTAATGGTAATCAGTAAAATT
1 AA-TAACTAAGAGTCAAAATAATAGTAACCAGT--AATT
* * * *
2759 GATAATTAAGAGTCAAAGTAATAGTAATCAGTAA
1 AATAACTAAGAGTCAAAATAATAGTAACCAGTAA
2793 ATCGATAGTT
Statistics
Matches: 166, Mismatches: 9, Indels: 12
0.89 0.05 0.06
Matches are distributed among these distances:
33 29 0.17
34 3 0.02
36 2 0.01
37 98 0.59
38 29 0.17
39 5 0.03
ACGTcount: A:0.49, C:0.10, G:0.15, T:0.25
Consensus pattern (36 bp):
AATAACTAAGAGTCAAAATAATAGTAACCAGTAATT
Found at i:2741 original size:16 final size:16
Alignment explanation
Indices: 2720--2780 Score: 50
Period size: 19 Copynumber: 3.4 Consensus size: 16
2710 ACCAGTAATT
2720 AAGTAATTAAGAGTCA
1 AAGTAATTAAGAGTCA
* *
2736 AAGTAATGGTAATCAGTAA
1 AAGTAAT--TAA-GAGTCA
2755 AATTGATAATTAAGAGTCA
1 AA--G-TAATTAAGAGTCA
2774 AAGTAAT
1 AAGTAAT
2781 AGTAATCAGT
Statistics
Matches: 35, Mismatches: 4, Indels: 12
0.69 0.08 0.24
Matches are distributed among these distances:
16 11 0.31
17 1 0.03
18 3 0.09
19 12 0.34
20 3 0.09
21 1 0.03
22 4 0.11
ACGTcount: A:0.49, C:0.05, G:0.18, T:0.28
Consensus pattern (16 bp):
AAGTAATTAAGAGTCA
Found at i:2774 original size:38 final size:37
Alignment explanation
Indices: 2583--2851 Score: 185
Period size: 37 Copynumber: 7.3 Consensus size: 37
2573 CCCAATACAC
* * *
2583 TAAGAGTCAAAATAATAGTAACCAGT-AAT---TAAC
1 TAAGAGTCAAAGTAATAGTAATCAGTAAATCGATAAT
* * * ** *
2616 TAAGAGTCAAAATGATAGTAACCAGT-AATTAACTAAC
1 TAAGAGTCAAAGTAATAGTAATCAGTAAATCGA-TAAT
* * * ** *
2653 TAAGAGTCAAAATGATAGTAACCAGT-AATTAAGTAAC
1 TAAGAGTCAAAGTAATAGTAATCAGTAAATCGA-TAAT
* * * **
2690 TAAGAGTCAAAATGATAGTAACCAGT-AATTAAGTAAT
1 TAAGAGTCAAAGTAATAGTAATCAGTAAATCGA-TAAT
* *
2727 TAAGAGTCAAAGTAATGGTAATCAGTAAAATTGATAAT
1 TAAGAGTCAAAGTAATAGTAATCAGT-AAATCGATAAT
*
2765 TAAGAGTCAAAGTAATAGTAATCAGTAAATCGATAGT
1 TAAGAGTCAAAGTAATAGTAATCAGTAAATCGATAAT
*
2802 TAAGAGTCAAGGTAAAAATAGTAATCAGTAAATC-AGTAAT
1 TAAGAGTCAAAGT---AATAGTAATCAGTAAATCGA-TAAT
*
2842 TAAGAATCAA
1 TAAGAGTCAA
2852 GGGATTAATC
Statistics
Matches: 212, Mismatches: 14, Indels: 13
0.89 0.06 0.05
Matches are distributed among these distances:
33 28 0.13
37 119 0.56
38 29 0.14
39 6 0.03
40 30 0.14
ACGTcount: A:0.49, C:0.09, G:0.16, T:0.26
Consensus pattern (37 bp):
TAAGAGTCAAAGTAATAGTAATCAGTAAATCGATAAT
Found at i:2829 original size:40 final size:37
Alignment explanation
Indices: 2723--2878 Score: 158
Period size: 40 Copynumber: 4.2 Consensus size: 37
2713 AGTAATTAAG
* * *
2723 TAATTAAGAGTCAAAGTAATGGTAATCAGTAAAATTGA
1 TAATTAAGAGTCAAGGTAATAGTAATCAGT-AAATCGA
*
2761 TAATTAAGAGTCAAAGTAATAGTAATCAGTAAATCGA
1 TAATTAAGAGTCAAGGTAATAGTAATCAGTAAATCGA
*
2798 TAGTTAAGAGTCAAGGTAAAAATAGTAATCAGTAAATC-A
1 TAATTAAGAGTCAAGGT---AATAGTAATCAGTAAATCGA
* * *
2837 GTAATTAAGAATCAAGG-GAT--TAATCAGTAAATTGA
1 -TAATTAAGAGTCAAGGTAATAGTAATCAGTAAATCGA
*
2872 TACTTAA
1 TAATTAA
2879 AGGAGAAAGT
Statistics
Matches: 104, Mismatches: 9, Indels: 14
0.82 0.07 0.11
Matches are distributed among these distances:
34 18 0.17
35 1 0.01
36 2 0.02
37 21 0.20
38 29 0.28
39 1 0.01
40 32 0.31
ACGTcount: A:0.47, C:0.07, G:0.17, T:0.28
Consensus pattern (37 bp):
TAATTAAGAGTCAAGGTAATAGTAATCAGTAAATCGA
Found at i:2957 original size:23 final size:22
Alignment explanation
Indices: 2921--2966 Score: 56
Period size: 23 Copynumber: 2.0 Consensus size: 22
2911 GAAAAGGAAG
*
2921 TAAAAAGGACTAATCAGTAAAT
1 TAAAAAGGACTAATAAGTAAAT
* *
2943 TAAAAAGAGATTAATAATTAAAT
1 TAAAAAG-GACTAATAAGTAAAT
2966 T
1 T
2967 GGTAATCAAA
Statistics
Matches: 20, Mismatches: 3, Indels: 1
0.83 0.12 0.04
Matches are distributed among these distances:
22 7 0.35
23 13 0.65
ACGTcount: A:0.57, C:0.04, G:0.11, T:0.28
Consensus pattern (22 bp):
TAAAAAGGACTAATAAGTAAAT
Found at i:3003 original size:18 final size:19
Alignment explanation
Indices: 2980--3020 Score: 59
Period size: 19 Copynumber: 2.2 Consensus size: 19
2970 AATCAAATGG
2980 TAAGAGT-AAAAA-GGATAT
1 TAAGAGTGAAAAATGG-TAT
2998 TAAGAGTGAAAAATGGTAT
1 TAAGAGTGAAAAATGGTAT
3017 TAAG
1 TAAG
3021 CAAAAAGAGT
Statistics
Matches: 21, Mismatches: 0, Indels: 3
0.88 0.00 0.12
Matches are distributed among these distances:
18 7 0.33
19 12 0.57
20 2 0.10
ACGTcount: A:0.51, C:0.00, G:0.24, T:0.24
Consensus pattern (19 bp):
TAAGAGTGAAAAATGGTAT
Found at i:3035 original size:26 final size:26
Alignment explanation
Indices: 2999--3280 Score: 245
Period size: 26 Copynumber: 10.8 Consensus size: 26
2989 AAAGGATATT
* *
2999 AAGAGTGAAAAATGGTATTAAGCAAA
1 AAGAGTAAAAAATGGTATTAAGTAAA
*
3025 AAGAGTAAAAAATGGTATTAAATAAA
1 AAGAGTAAAAAATGGTATTAAGTAAA
* ** * * *
3051 GAGAG-AAAAAATATTATCATGGTAAT
1 AAGAGTAAAAAATGGTATTA-AGTAAA
* *
3077 AAGAGTAAAAAAAACCGGTATTAAGCAAAA
1 AAGAGT--AAAAAA-TGGTATTAAG-TAAA
**
3107 AAGAGTAAAAAATGGTATTAAGTATT
1 AAGAGTAAAAAATGGTATTAAGTAAA
*
3133 GAGAGT-AAAAATGGTATTAAGTAAA
1 AAGAGTAAAAAATGGTATTAAGTAAA
* ** * * *
3158 GAGAAAAAAAAATGGTATGATGGTAAT
1 AAGAGTAAAAAATGGTATTA-AGTAAA
*
3185 AAGAGTAAAAAATGGTATTAAGCAAAA
1 AAGAGTAAAAAATGGTATTAAG-TAAA
**
3212 AAGAGT-AAAAATGGTATTAAGTATT
1 AAGAGTAAAAAATGGTATTAAGTAAA
3237 AAGAGT-AAAAATGGTATTAAGT-AA
1 AAGAGTAAAAAATGGTATTAAGTAAA
3261 AA-AGT-AAAAATGGTATTAAG
1 AAGAGTAAAAAATGGTATTAAG
3281 AGTAAAAAAA
Statistics
Matches: 205, Mismatches: 42, Indels: 21
0.76 0.16 0.08
Matches are distributed among these distances:
23 18 0.09
24 2 0.01
25 55 0.27
26 68 0.33
27 37 0.18
28 6 0.03
29 7 0.03
30 12 0.06
ACGTcount: A:0.54, C:0.02, G:0.20, T:0.23
Consensus pattern (26 bp):
AAGAGTAAAAAATGGTATTAAGTAAA
Found at i:3087 original size:52 final size:51
Alignment explanation
Indices: 3006--3280 Score: 202
Period size: 51 Copynumber: 5.3 Consensus size: 51
2996 ATTAAGAGTG
* * * *
3006 AAAAATGGTATTAAGCAAAAAGAGTAAAAAATGGTATTAAATAAAGAGAGA
1 AAAAATAGTATTAAGTAATAAGAGTAAAAAATGGTATTAAATAAAAAGAGA
* * * *
3057 AAAAATATTATCATGGTAATAAGAGTAAAAAAAACCGGTATTAAGCA-AAAAAGAGTA
1 AAAAATAGTATTA-AGTAATAAGAGT--AAAAAA-TGGTATTAA--ATAAAAAGAG-A
* * * * * *
3114 AAAAATGGTATTAAGTATTGAGAGT-AAAAATGGTATTAAGTAAAGAGAAAA
1 AAAAATAGTATTAAGTAATAAGAGTAAAAAATGGTATTAAATAAAAAG-AGA
* * * *
3165 AAAAATGGTATGATGGTAATAAGAGTAAAAAATGGTATTAAGCA-AAAAAGAGT
1 AAAAATAGTATTA-AGTAATAAGAGTAAAAAATGGTATTAA--ATAAAAAGAGA
* * * *
3218 AAAAATGGTATTAAGTATTAAGAGT-AAAAATGGTATTAAGT-AAAA-AGT
1 AAAAATAGTATTAAGTAATAAGAGTAAAAAATGGTATTAAATAAAAAGAGA
*
3266 AAAAATGGTATTAAG
1 AAAAATAGTATTAAG
3281 AGTAAAAAAA
Statistics
Matches: 180, Mismatches: 30, Indels: 31
0.75 0.12 0.13
Matches are distributed among these distances:
48 18 0.10
49 4 0.02
51 42 0.23
52 37 0.21
53 32 0.18
54 11 0.06
55 8 0.04
56 16 0.09
57 12 0.07
ACGTcount: A:0.55, C:0.02, G:0.20, T:0.24
Consensus pattern (51 bp):
AAAAATAGTATTAAGTAATAAGAGTAAAAAATGGTATTAAATAAAAAGAGA
Found at i:3121 original size:108 final size:103
Alignment explanation
Indices: 2999--3270 Score: 375
Period size: 104 Copynumber: 2.6 Consensus size: 103
2989 AAAGGATATT
* ** * *
2999 AAGAGTGAAAAATGGTATTAAGCAAAAAGAGTAAAAAATGGTATTAAATAAAGAGAGAAAAAATA
1 AAGAGT-AAAAATGGTATTAAGTATTAAGAGT-AAAAATGGTATTAAGTAAAGAGA-AAAAAAAA
3064 T-TATCATGGTAATAAGAGTAAAAAAAACCGGTATTAAGCAAAA
63 TGTATCATGGTAATAAGAGT--AAAAAA-CGGTATTAAGCAAAA
*
3107 AAGAGTAAAAAATGGTATTAAGTATTGAGAGTAAAAATGGTATTAAGTAAAGAGAAAAAAAAATG
1 AAGAGT-AAAAATGGTATTAAGTATTAAGAGTAAAAATGGTATTAAGTAAAGAGAAAAAAAAAT-
* *
3172 GTATGATGGTAATAAGAGTAAAAAATGGTATTAAGCAAAA
64 GTATCATGGTAATAAGAGTAAAAAACGGTATTAAGCAAAA
* *
3212 AAGAGTAAAAATGGTATTAAGTATTAAGAGTAAAAATGGTATTAAGTAAAAAGTAAAAA
1 AAGAGTAAAAATGGTATTAAGTATTAAGAGTAAAAATGGTATTAAGTAAAGAGAAAAAA
3271 TGGTATTAAG
Statistics
Matches: 150, Mismatches: 12, Indels: 8
0.88 0.07 0.05
Matches are distributed among these distances:
104 50 0.33
105 20 0.13
106 14 0.09
107 22 0.15
108 44 0.29
ACGTcount: A:0.55, C:0.02, G:0.20, T:0.23
Consensus pattern (103 bp):
AAGAGTAAAAATGGTATTAAGTATTAAGAGTAAAAATGGTATTAAGTAAAGAGAAAAAAAAATGT
ATCATGGTAATAAGAGTAAAAAACGGTATTAAGCAAAA
Found at i:3183 original size:27 final size:26
Alignment explanation
Indices: 3113--3270 Score: 74
Period size: 25 Copynumber: 6.1 Consensus size: 26
3103 AAAAAAGAGT
* * * *
3113 AAAAAATGGTATTAAGTATTGAG-AG
1 AAAAAATGGTATGAAGTAATAAGAAA
* *
3138 TAAAAATGGTATTAAGTAA-AGAGAAA
1 AAAAAATGGTATGAAGTAATA-AGAAA
* **
3164 AAAAAATGGTATGATGGTAATAAGAGT
1 AAAAAATGGTATGA-AGTAATAAGAAA
* *
3191 AAAAAATGGTATTAAGCAA-AA-AAGA
1 AAAAAATGGTATGAAGTAATAAGAA-A
* * * *
3216 GTAAAAATGGTATTAAGTATTAAG-AG
1 -AAAAAATGGTATGAAGTAATAAGAAA
* * * *
3242 TAAAAATGGTATTAAGTAAAAAGTAA
1 AAAAAATGGTATGAAGTAATAAGAAA
3268 AAA
1 AAA
3271 TGGTATTAAG
Statistics
Matches: 102, Mismatches: 22, Indels: 17
0.72 0.16 0.12
Matches are distributed among these distances:
24 1 0.01
25 42 0.41
26 35 0.34
27 23 0.23
28 1 0.01
ACGTcount: A:0.54, C:0.01, G:0.20, T:0.25
Consensus pattern (26 bp):
AAAAAATGGTATGAAGTAATAAGAAA
Found at i:3255 original size:18 final size:18
Alignment explanation
Indices: 3232--3288 Score: 69
Period size: 23 Copynumber: 2.9 Consensus size: 18
3222 ATGGTATTAA
3232 GTATTAAGAGTAAAAATG
1 GTATTAAGAGTAAAAATG
3250 GTATTAAGTAAAAAGTAAAAATG
1 GTATTAAG-----AGTAAAAATG
3273 GTATTAAGAGTAAAAA
1 GTATTAAGAGTAAAAA
3289 AAAATGGTGG
Statistics
Matches: 34, Mismatches: 0, Indels: 10
0.77 0.00 0.23
Matches are distributed among these distances:
18 16 0.47
23 18 0.53
ACGTcount: A:0.54, C:0.00, G:0.19, T:0.26
Consensus pattern (18 bp):
GTATTAAGAGTAAAAATG
Found at i:3292 original size:23 final size:21
Alignment explanation
Indices: 3218--3296 Score: 79
Period size: 25 Copynumber: 3.4 Consensus size: 21
3208 AAAAAAGAGT
3218 AAAAATGGTATTAAGTATTAAGAG
1 AAAAATGGTATTAAGTA--AA-AG
3242 TAAAAATGGTATTAAGTAAAAAG
1 -AAAAATGGTATTAAGT-AAAAG
3265 TAAAAATGGTATTAAGAGTAAAA-
1 -AAAAATGGTATT-A-AGTAAAAG
3288 AAAAATGGT
1 AAAAATGGT
3297 GGAAAATGTT
Statistics
Matches: 51, Mismatches: 0, Indels: 9
0.85 0.00 0.15
Matches are distributed among these distances:
22 9 0.18
23 15 0.29
24 7 0.14
25 19 0.37
26 1 0.02
ACGTcount: A:0.54, C:0.00, G:0.19, T:0.27
Consensus pattern (21 bp):
AAAAATGGTATTAAGTAAAAG
Found at i:9021 original size:13 final size:14
Alignment explanation
Indices: 8998--9026 Score: 51
Period size: 13 Copynumber: 2.1 Consensus size: 14
8988 ACTTTTACTT
8998 AATGCATGAATGCA
1 AATGCATGAATGCA
9012 AATG-ATGAATGCA
1 AATGCATGAATGCA
9025 AA
1 AA
9027 GTCCGGTTAT
Statistics
Matches: 15, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
13 11 0.73
14 4 0.27
ACGTcount: A:0.48, C:0.10, G:0.21, T:0.21
Consensus pattern (14 bp):
AATGCATGAATGCA
Found at i:13229 original size:12 final size:12
Alignment explanation
Indices: 13212--13285 Score: 54
Period size: 12 Copynumber: 6.7 Consensus size: 12
13202 AGAAACCGAT
*
13212 TATATAATTTTA
1 TATATAATATTA
13224 TATATAATATTA
1 TATATAATATTA
13236 TATAT-ATA-TA
1 TATATAATATTA
* * *
13246 TGT-TATTCGTT-
1 TATATAAT-ATTA
13257 TATAT-ATA-TA
1 TATATAATATTA
13267 TATAT-ATATTA
1 TATATAATATTA
13278 TATATAAT
1 TATATAAT
13286 CTATATAATA
Statistics
Matches: 48, Mismatches: 7, Indels: 14
0.70 0.10 0.20
Matches are distributed among these distances:
9 2 0.04
10 13 0.27
11 13 0.27
12 20 0.42
ACGTcount: A:0.42, C:0.01, G:0.03, T:0.54
Consensus pattern (12 bp):
TATATAATATTA
Found at i:13311 original size:2 final size:2
Alignment explanation
Indices: 13222--13292 Score: 55
Period size: 2 Copynumber: 38.0 Consensus size: 2
13212 TATATAATTT
* * *
13222 TA TA TA TA -A TA T- TA TA TA TA TA TA TG T- TA T- TCG TT TA TA
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA T-A TA TA TA
*
13261 TA TA TA TA TA TA TA T- TA TA TA TA -A TC TA TA TA
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
13293 ATAAGTATTT
Statistics
Matches: 57, Mismatches: 5, Indels: 14
0.75 0.07 0.18
Matches are distributed among these distances:
1 6 0.11
2 50 0.88
3 1 0.02
ACGTcount: A:0.42, C:0.03, G:0.03, T:0.52
Consensus pattern (2 bp):
TA
Found at i:13312 original size:11 final size:12
Alignment explanation
Indices: 13211--13312 Score: 59
Period size: 13 Copynumber: 8.1 Consensus size: 12
13201 GAGAAACCGA
13211 TTATATA-AT-T
1 TTATATATATAT
13221 TTATATATAATAT
1 TTATATAT-ATAT
13234 TATATATATATAT
1 T-TATATATATAT
* *
13247 GTTATTCGTTTATAT
1 -TTA-T-ATATATAT
*
13262 ATATATATATAT
1 TTATATATATAT
13274 ATTATATATA-AT
1 -TTATATATATAT
*
13286 CTATATAATAAGTAT
1 TTATAT-AT-A-TAT
13301 TTA-ATATATAT
1 TTATATATATAT
13312 T
1 T
13313 AATTTAACCT
Statistics
Matches: 72, Mismatches: 8, Indels: 23
0.70 0.08 0.22
Matches are distributed among these distances:
10 7 0.10
11 9 0.12
12 13 0.18
13 20 0.28
14 13 0.18
15 10 0.14
ACGTcount: A:0.42, C:0.02, G:0.03, T:0.53
Consensus pattern (12 bp):
TTATATATATAT
Found at i:13774 original size:46 final size:46
Alignment explanation
Indices: 13718--13806 Score: 160
Period size: 46 Copynumber: 1.9 Consensus size: 46
13708 TGGCTCTGTT
*
13718 ATTTATTTGCAGATCTGGGTTTTGTTTATTTTTCAAGGATAGTTTG
1 ATTTACTTGCAGATCTGGGTTTTGTTTATTTTTCAAGGATAGTTTG
*
13764 ATTTACTTGCAGATCTGGGTTTTGTTTATTTTTTAAGGATAGT
1 ATTTACTTGCAGATCTGGGTTTTGTTTATTTTTCAAGGATAGT
13807 GATCGGTGTT
Statistics
Matches: 41, Mismatches: 2, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
46 41 1.00
ACGTcount: A:0.20, C:0.07, G:0.21, T:0.52
Consensus pattern (46 bp):
ATTTACTTGCAGATCTGGGTTTTGTTTATTTTTCAAGGATAGTTTG
Found at i:16476 original size:28 final size:27
Alignment explanation
Indices: 16437--16527 Score: 128
Period size: 27 Copynumber: 3.3 Consensus size: 27
16427 AGGGTCACCT
* *
16437 AGGGGTATTTTGGTCATTTTTACATTC
1 AGGGGCATTTTTGTCATTTTTACATTC
16464 AGGGGCATTTTTGTCATTTTTACATTC
1 AGGGGCATTTTTGTCATTTTTACATTC
* * *
16491 AGGGGCATTTTTGTCATTCTTGCATTT
1 AGGGGCATTTTTGTCATTTTTACATTC
16518 AGGGGGCATT
1 A-GGGGCATT
16528 CAGGTCATTT
Statistics
Matches: 58, Mismatches: 5, Indels: 1
0.91 0.08 0.02
Matches are distributed among these distances:
27 50 0.86
28 8 0.14
ACGTcount: A:0.18, C:0.13, G:0.24, T:0.45
Consensus pattern (27 bp):
AGGGGCATTTTTGTCATTTTTACATTC
Found at i:21996 original size:18 final size:18
Alignment explanation
Indices: 21973--22008 Score: 63
Period size: 18 Copynumber: 2.0 Consensus size: 18
21963 CAAGGATTGG
*
21973 AAGGAAGCATGGATAAGC
1 AAGGAAGCATGGACAAGC
21991 AAGGAAGCATGGACAAGC
1 AAGGAAGCATGGACAAGC
22009 TTAAAGGAGA
Statistics
Matches: 17, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
18 17 1.00
ACGTcount: A:0.44, C:0.14, G:0.33, T:0.08
Consensus pattern (18 bp):
AAGGAAGCATGGACAAGC
Done.