Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006852.1 Corchorus capsularis cultivar CVL-1 contig06873, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39720

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106--136
1
31.0
1
100
0
62
100
0
0
0
0.00
1960--1999
19
2.1
19
100
0
80
20
30
25
25
1.99
5946--6042
6
16.0
6
92
1
158
3
0
30
65
1.07
20465--20780
164
1.9
165
83
3
402
37
21
16
24
1.93
23428--23466
14
2.6
14
88
8
51
48
35
5
10
1.59
24134--24162
14
2.1
14
100
0
58
34
13
6
44
1.71
28774--28799
13
2.0
13
100
0
52
38
7
23
30
1.83
28785--28864
27
3.0
27
92
7
146
32
18
15
33
1.92
29751--29828
38
2.1
38
95
2
140
47
10
16
25
1.78

Tables:   1

The End!