Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006854.1 Corchorus capsularis cultivar CVL-1 contig06875, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14601

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
684--717
16
2.2
16
89
5
52
58
8
2
29
1.43
1999--2034
19
1.9
18
88
5
54
36
22
2
38
1.69
3921--4025
33
3.2
33
78
5
113
23
10
19
46
1.80
3973--4061
33
2.7
33
80
11
94
26
10
21
41
1.85
4472--4559
30
2.9
30
94
3
151
27
14
35
22
1.93
6180--6215
19
1.9
18
88
5
54
30
22
5
41
1.76
6189--6305
51
2.3
51
96
0
225
35
21
6
35
1.80
13066--13107
13
3.5
13
75
18
54
11
26
42
19
1.85
13077--13150
33
2.2
33
85
4
96
6
25
45
21
1.76
13054--13109
23
2.4
23
100
0
112
10
25
46
17
1.80

Tables:   1

The End!