Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006855.1 Corchorus capsularis cultivar CVL-1 contig06876, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7309

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4105--4148
22
2.0
21
86
4
61
20
6
2
70
1.21
5616--5688
16
4.7
15
81
6
74
5
17
42
34
1.73
5618--5689
31
2.3
32
80
2
83
5
18
41
34
1.73
5630--5688
16
3.8
16
86
6
77
5
16
38
38
1.71
6118--6189
31
2.3
33
72
13
80
56
11
5
26
1.55
6411--6451
16
2.6
16
92
0
64
12
14
36
36
1.84

Tables:   1

The End!