Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006860.1 Corchorus capsularis cultivar CVL-1 contig06881, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32843

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
486--564
37
2.1
37
97
0
149
29
31
7
31
1.85
11410--11486
28
2.7
28
86
8
102
28
10
28
32
1.90
13131--13164
5
6.8
5
96
0
59
23
55
0
20
1.43
19169--19209
5
8.2
5
100
0
82
80
0
19
0
0.71
19930--19983
26
2.1
26
82
6
65
50
16
9
24
1.74
28241--28287
24
2.0
26
84
16
66
42
19
14
23
1.88
30881--30919
21
2.0
20
85
10
53
35
20
10
33
1.86

Tables:   1

The End!