Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006863.1 Corchorus capsularis cultivar CVL-1 contig06884, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18993

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
230--291
32
1.9
32
93
0
106
50
14
12
22
1.77
1--385
193
2.0
194
92
0
646
47
12
15
23
1.80
3811--3850
20
2.0
20
100
0
80
60
15
0
25
1.35
4022--4118
33
2.9
33
79
11
110
14
43
30
11
1.81
4176--4365
32
5.9
32
90
4
267
12
28
42
16
1.84
6062--6097
11
3.3
11
88
0
54
38
2
8
50
1.47
6051--6097
22
2.1
22
88
0
67
42
4
6
46
1.48
15212--15275
21
3.1
21
68
8
51
40
7
18
32
1.80
17714--17757
16
2.8
16
82
0
61
6
13
38
40
1.71

Tables:   1

The End!