Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006866.1 Corchorus capsularis cultivar CVL-1 contig06887, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15834

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
449--482
17
2.0
17
88
0
50
11
14
35
38
1.83
655--687
16
2.1
16
94
0
57
3
12
33
51
1.54
1896--1922
14
1.9
14
100
0
54
29
7
18
44
1.77
1977--2033
17
3.0
21
66
23
54
36
0
3
59
1.14
2113--2140
14
2.0
14
100
0
56
14
0
35
50
1.43
6618--6659
21
2.0
21
95
0
75
42
40
4
11
1.63
7930--8019
16
5.8
16
76
8
87
6
13
37
42
1.70
8008--8062
6
9.5
6
76
7
51
1
21
49
27
1.60
8008--8062
23
2.4
23
75
6
58
1
21
49
27
1.60
8009--8060
17
3.1
17
85
0
68
1
21
51
25
1.57
8806--8850
16
2.8
16
86
0
63
4
15
42
37
1.67
10825--10859
8
4.4
8
100
0
70
62
0
0
37
0.95

Tables:   1

The End!