Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006869.1 Corchorus capsularis cultivar CVL-1 contig06890, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18774

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3408--3483
36
2.1
36
97
0
143
25
32
2
39
1.70
6015--6048
15
2.3
15
89
0
50
11
14
44
29
1.81
6061--6179
16
7.4
16
85
0
166
9
21
35
33
1.86
6061--6187
32
4.0
32
91
2
193
9
22
35
33
1.86
6106--6191
16
5.4
15
85
2
91
8
24
37
30
1.84
7085--7131
16
2.9
16
78
12
60
12
19
34
34
1.89
7085--7158
32
2.3
32
83
0
85
16
18
31
33
1.93
10822--10854
5
6.6
5
86
13
50
0
18
0
81
0.68
12033--12097
32
2.0
33
87
6
96
13
7
16
61
1.54
15864--15917
16
3.4
16
80
10
74
16
11
38
33
1.84
15864--15927
15
4.1
16
78
9
69
17
10
35
35
1.85
15874--15946
32
2.3
32
85
0
92
17
10
32
38
1.85
16092--16166
16
4.7
16
77
0
78
5
14
32
48
1.67
18388--18460
38
1.9
38
94
0
128
34
30
6
28
1.83

Tables:   1

The End!