Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006873.1 Corchorus capsularis cultivar CVL-1 contig06894, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23197

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2597--2625
15
2.0
15
93
6
51
34
3
13
48
1.60
5353--5397
22
2.1
21
84
8
56
48
2
24
24
1.62
9333--9522
97
2.0
97
100
0
380
51
11
10
26
1.70
13039--13106
32
2.1
32
97
0
127
35
11
29
23
1.90
19818--20243
70
6.1
70
85
5
501
25
26
18
29
1.98
19818--20245
141
3.1
138
84
7
519
25
26
18
29
1.98
20413--20442
3
10.3
3
92
7
53
70
0
30
0
0.88

Tables:   1

The End!