Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006875.1 Corchorus capsularis cultivar CVL-1 contig06896, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8871

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
309--333
10
2.5
10
100
0
50
24
8
20
48
1.76
1039--1072
18
1.9
17
88
5
50
8
44
0
47
1.34
2798--3105
95
3.2
95
82
3
359
22
27
22
27
1.99
2793--3105
48
6.6
48
78
1
288
22
28
22
27
1.99
3220--3435
84
2.6
85
91
0
344
24
31
23
20
1.98
6482--6515
18
1.9
17
88
5
50
8
44
0
47
1.34
7552--7616
33
2.0
32
87
3
94
27
1
20
50
1.57

Tables:   1

The End!