Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006877.1 Corchorus capsularis cultivar CVL-1 contig06898, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26630

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6661--6698
20
1.9
20
88
0
58
39
13
23
23
1.90
9222--9257
19
1.9
18
88
5
54
41
2
22
33
1.68
12016--12065
15
3.4
14
78
8
55
56
0
0
44
0.99
12024--12079
18
3.2
18
78
19
64
58
0
0
41
0.98
12041--12083
17
2.6
16
86
13
61
58
0
0
41
0.98
13262--13293
12
2.8
11
90
9
55
0
15
0
84
0.63
24073--24179
32
3.5
30
80
12
110
13
4
20
61
1.49
25246--25273
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!