Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006878.1 Corchorus capsularis cultivar CVL-1 contig06899, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17538

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2488--2523
18
2.0
18
100
0
72
27
22
11
38
1.88
4627--4662
13
2.9
12
92
8
63
47
8
11
33
1.69
12392--12607
111
1.9
113
83
7
280
18
21
3
56
1.57
12386--12606
27
8.0
27
78
10
196
18
21
3
56
1.57
12392--12607
57
3.9
56
76
13
198
18
21
3
56
1.57
12618--12737
7
16.7
7
69
16
59
20
21
2
55
1.56
12591--12671
29
2.9
29
80
14
89
23
18
2
55
1.54
12597--12759
36
4.5
36
85
3
202
20
20
1
56
1.52
12789--12870
40
2.0
40
86
4
112
20
25
3
50
1.65
12793--12884
40
2.3
40
79
7
98
22
25
3
48
1.65
13042--13538
38
13.1
38
93
0
834
27
15
5
50
1.67
13096--13159
22
3.2
22
62
32
52
31
15
4
48
1.66
14341--14511
51
3.3
50
89
4
234
39
17
5
36
1.74
14341--14509
52
3.3
52
88
1
250
39
17
5
36
1.74

Tables:   1

The End!