Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006884.1 Corchorus capsularis cultivar CVL-1 contig06905, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32065

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5917--5947
16
1.9
16
93
0
53
74
3
3
19
1.10
6335--6382
15
3.0
16
78
9
62
39
14
27
18
1.90
6316--6382
36
2.0
33
88
11
100
38
14
28
17
1.90
7014--7076
22
2.9
22
81
9
74
25
38
22
14
1.92
14263--14304
18
2.3
18
95
0
75
28
21
7
42
1.79
14348--14449
38
2.5
40
81
12
120
41
18
7
32
1.79
17637--17684
17
2.8
17
83
0
60
27
22
16
33
1.96
23058--23094
15
2.3
16
90
9
58
54
0
45
0
1.00
29487--29519
2
16.5
2
100
0
66
48
0
0
51
1.00
30471--30512
11
3.9
11
79
14
52
45
14
9
30
1.77
30463--30511
22
2.2
22
96
0
89
46
18
8
26
1.76

Tables:   1

The End!