Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006889.1 Corchorus capsularis cultivar CVL-1 contig06910, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8413

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
144--186
19
2.3
19
84
8
61
55
18
18
6
1.64
688--778
36
2.5
36
81
10
114
41
27
15
15
1.87
764--960
107
1.8
107
84
4
272
36
30
16
16
1.91
760--977
36
6.1
36
75
8
169
38
28
16
16
1.91
826--995
71
2.4
71
84
2
225
36
28
17
17
1.92
3457--3505
14
3.7
14
78
13
59
38
10
8
42
1.68
3451--3505
26
2.2
25
86
3
74
43
10
7
38
1.68
6623--6846
115
1.9
116
83
5
292
45
19
12
21
1.83
7799--8173
35
10.6
36
85
6
448
35
16
9
38
1.80
7799--8173
70
5.3
70
89
2
495
35
16
9
38
1.80
8069--8160
8
10.6
8
70
15
58
40
14
4
41
1.65

Tables:   1

The End!