Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000689.1 Corchorus capsularis cultivar CVL-1 contig00689, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1451

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--46
12
3.8
12
80
11
58
41
0
23
34
1.55
154--284
18
7.3
18
75
3
102
25
19
24
29
1.99
154--284
27
5.2
27
76
15
145
25
19
24
29
1.99
155--258
45
2.3
45
88
6
149
26
19
23
30
1.98
155--284
45
2.9
44
82
6
118
26
20
23
30
1.98
537--574
15
2.5
15
80
16
51
39
0
36
23
1.55

Tables:   1

The End!