Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006890.1 Corchorus capsularis cultivar CVL-1 contig06911, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23305

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3851--3914
27
2.4
28
78
7
78
28
10
25
35
1.89
8356--8407
27
1.9
27
88
7
79
26
9
25
38
1.86
11041--11128
29
2.8
32
83
14
112
43
3
7
45
1.50
11043--11126
17
5.2
17
68
23
65
44
3
8
44
1.51
15238--15278
21
2.0
21
100
0
82
39
4
14
41
1.67
15708--15748
18
2.3
18
80
16
50
9
19
0
70
1.14
19731--19765
15
2.2
16
90
5
54
0
22
0
77
0.78
19735--19775
20
2.0
20
95
4
73
0
26
0
73
0.84
19832--19903
26
2.7
27
76
10
85
41
27
12
18
1.86
22027--22104
26
3.0
26
96
3
140
15
17
16
50
1.79
22446--22471
7
3.7
7
100
0
52
88
0
11
0
0.52

Tables:   1

The End!