Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006896.1 Corchorus capsularis cultivar CVL-1 contig06917, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20419

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
901--936
18
1.9
18
88
5
54
33
22
5
38
1.77
16207--16524
66
4.9
65
83
6
340
40
16
19
23
1.91
17585--17623
20
2.0
20
90
5
62
5
30
0
64
1.15
17738--17764
13
2.1
13
100
0
54
0
44
0
55
0.99
19383--19427
7
6.0
7
82
14
54
0
17
2
80
0.82
19382--19427
15
2.9
16
87
6
67
0
19
2
78
0.86
19389--19427
16
2.5
15
91
4
60
0
15
2
82
0.79
20195--20243
21
2.3
21
82
6
55
14
28
16
40
1.87

Tables:   1

The End!