Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006899.1 Corchorus capsularis cultivar CVL-1 contig06920, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32604

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
855--916
32
1.9
32
83
0
79
51
14
9
24
1.72
1047--1108
32
1.9
32
93
0
106
50
14
12
22
1.77
809--1205
192
2.1
191
90
6
631
48
13
14
24
1.78
2014--2087
38
2.0
37
91
2
121
21
17
14
45
1.84
6323--6350
2
14.0
2
100
0
56
50
0
0
50
1.00
6534--6561
14
2.0
14
100
0
56
78
0
21
0
0.75
13321--13402
40
2.1
40
90
2
130
42
14
20
21
1.88

Tables:   1

The End!