Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006902.1 Corchorus capsularis cultivar CVL-1 contig06923, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31749

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3409--3461
2
28.5
2
81
14
69
47
0
0
52
1.00
3409--3461
21
2.5
22
87
12
83
47
0
0
52
1.00
3409--3461
15
3.3
17
84
12
76
47
0
0
52
1.00
5053--5137
31
2.7
31
88
0
125
22
27
30
20
1.98
5699--5765
31
2.2
31
89
5
100
34
26
19
19
1.96
9238--9276
18
2.1
19
86
13
55
28
17
0
53
1.44
11831--12076
78
3.1
78
86
8
341
47
2
12
37
1.53
13952--14010
30
2.0
30
86
6
84
45
6
16
30
1.74
15445--15479
15
2.3
15
90
9
54
45
17
25
11
1.81
15700--17048
484
2.8
465
82
10
1539
38
14
13
33
1.85
19413--19519
33
3.2
33
80
9
103
9
28
38
23
1.86
24831--24865
5
7.0
5
87
12
54
20
0
0
80
0.72
25936--26039
33
3.2
33
84
5
113
8
29
38
23
1.84
28135--28168
17
2.0
17
88
0
50
32
0
8
58
1.29

Tables:   1

The End!