Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006905.1 Corchorus capsularis cultivar CVL-1 contig06926, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27944

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1356--1408
18
2.9
18
91
0
88
26
43
22
7
1.80
2271--2303
13
2.5
13
100
0
66
45
12
24
18
1.83
2693--2768
36
2.1
36
82
0
89
30
19
28
21
1.97
6367--6392
13
2.0
13
100
0
52
15
7
0
76
0.99
12420--12714
109
2.7
109
88
6
432
49
1
10
37
1.48
18238--18303
34
2.0
32
94
5
114
48
3
7
40
1.47
18237--18293
16
3.4
16
82
17
80
47
1
8
42
1.45
18237--18302
16
3.9
17
72
18
57
48
1
7
42
1.40
23529--23587
7
8.4
7
100
0
118
57
0
13
28
1.37
24671--24699
2
14.5
2
100
0
58
51
0
0
48
1.00
25959--26046
39
2.6
32
80
19
106
53
10
2
34
1.47
26752--26794
11
3.9
11
90
0
68
46
6
4
41
1.51
26748--26794
22
2.1
22
96
0
85
46
6
4
42
1.48

Tables:   1

The End!