Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006906.1 Corchorus capsularis cultivar CVL-1 contig06927, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8183

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105--147
11
3.9
11
90
0
68
46
6
4
41
1.51
101--147
22
2.1
22
96
0
85
46
6
4
42
1.48
4147--4235
29
3.1
29
82
8
119
15
13
28
42
1.85
4347--4425
23
3.2
22
68
25
59
22
8
17
50
1.74
4988--5019
2
16.0
2
100
0
64
50
0
0
50
1.00
6435--6467
16
2.1
16
94
5
59
36
9
24
30
1.86
7254--7399
49
3.0
49
80
3
168
38
7
19
34
1.80

Tables:   1

The End!