Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006908.1 Corchorus capsularis cultivar CVL-1 contig06929, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29323

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1177--1224
25
2.0
24
84
12
62
43
8
8
39
1.65
2730--2754
10
2.5
10
100
0
50
28
8
24
40
1.83
6473--6518
24
1.9
24
86
0
65
39
6
6
47
1.55
9699--9879
55
3.3
55
74
13
183
28
17
17
35
1.93
27280--27308
2
14.5
2
100
0
58
48
0
0
51
1.00
29019--29051
12
2.7
13
86
13
52
81
0
0
18
0.68
29059--29160
31
3.3
31
83
5
109
31
19
14
34
1.92

Tables:   1

The End!