Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006910.1 Corchorus capsularis cultivar CVL-1 contig06931, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16222

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
142--174
6
5.3
6
92
7
57
54
15
0
30
1.41
137--180
19
2.5
17
79
13
54
54
15
4
25
1.60
1122--1146
10
2.5
10
100
0
50
24
8
20
48
1.76
4298--4333
2
18.0
2
88
11
56
47
0
2
50
1.15
6504--6545
5
8.6
5
92
5
68
2
38
21
38
1.67
7506--7542
17
2.1
18
90
5
58
54
5
5
35
1.47
7671--7729
22
2.7
22
91
0
91
49
3
6
40
1.46

Tables:   1

The End!