Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006912.1 Corchorus capsularis cultivar CVL-1 contig06933, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12935

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
304--406
49
2.1
49
85
7
138
39
5
19
34
1.76
327--432
49
2.2
49
85
0
140
40
6
19
33
1.78
1302--1672
55
6.7
54
92
3
589
47
8
19
24
1.76
1622--1758
71
1.9
72
87
1
204
46
6
18
27
1.74
1703--1764
16
3.8
15
76
17
61
48
8
17
25
1.75
2027--2119
22
4.2
23
75
15
81
54
6
17
21
1.64
8478--8507
11
2.7
11
100
0
60
26
20
10
43
1.83
9983--10095
24
4.5
26
91
6
180
29
37
17
15
1.91
9983--10096
50
2.3
50
95
0
210
29
36
17
15
1.91
12344--12379
19
1.9
18
88
5
54
33
22
2
41
1.68

Tables:   1

The End!