Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006914.1 Corchorus capsularis cultivar CVL-1 contig06935, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10429

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2818--2845
7
4.0
7
100
0
56
28
14
14
42
1.84
2963--3012
25
2.0
25
84
0
64
22
14
12
52
1.74
4166--4223
24
2.4
24
94
0
98
63
0
1
34
1.04
4166--4211
11
3.9
12
86
13
69
63
0
0
36
0.95
4172--4224
14
4.1
14
77
22
62
62
0
1
35
1.06
6325--6355
16
1.9
16
100
0
62
22
12
0
64
1.27
6521--6577
28
2.1
28
83
3
71
54
8
19
17
1.68
10289--10327
2
19.5
2
100
0
78
51
0
0
48
1.00

Tables:   1

The End!