Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006921.1 Corchorus capsularis cultivar CVL-1 contig06942, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5659

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
257--357
33
3.1
33
85
2
114
23
31
10
33
1.90
305--383
33
2.4
33
85
6
106
21
32
5
40
1.75
4500--4544
14
3.2
14
80
0
63
31
11
4
53
1.56
4447--4515
36
1.9
36
91
2
113
28
10
7
53
1.61
4750--4784
18
1.9
18
94
0
61
40
14
5
40
1.69
5462--5644
32
5.7
32
88
4
246
18
39
31
10
1.85

Tables:   1

The End!