Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006928.1 Corchorus capsularis cultivar CVL-1 contig06949, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25752

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23--68
18
2.6
18
74
16
51
41
28
26
4
1.74
887--978
32
3.0
31
84
6
118
27
30
18
23
1.98
3124--3157
11
2.9
12
91
8
61
41
14
0
44
1.45
5086--5136
20
2.5
21
80
6
68
54
13
3
27
1.56
5314--5353
20
2.0
21
90
5
64
52
12
0
35
1.39
8580--8641
30
2.1
30
90
6
99
50
11
6
32
1.64
9519--9557
12
3.0
13
85
11
53
43
2
0
53
1.14
11270--11327
30
1.9
30
86
6
82
37
18
6
36
1.78
11272--11342
30
2.4
28
77
15
72
35
18
8
38
1.81
16852--16881
2
15.5
2
93
6
53
50
0
0
50
1.00
17632--18058
214
2.0
214
95
0
775
32
14
15
37
1.88

Tables:   1

The End!