Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006929.1 Corchorus capsularis cultivar CVL-1 contig06950, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10116

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1234--1335
51
2.0
51
98
0
195
42
7
18
31
1.79
1554--1596
14
3.3
13
84
15
54
0
13
6
79
0.93
1923--2034
56
2.0
57
92
1
190
25
17
30
26
1.97
1974--2501
70
7.6
70
89
1
794
28
17
29
25
1.97
1974--2501
139
3.8
139
91
1
824
28
17
29
25
1.97
2645--2703
30
1.9
30
83
13
75
10
20
13
55
1.66
2985--3083
50
2.0
50
89
0
153
36
14
16
33
1.88
3352--3413
14
4.5
14
80
9
74
1
17
0
80
0.79
3367--3411
8
6.1
8
84
10
53
0
15
0
84
0.62
3371--3412
6
6.8
6
82
12
50
0
14
0
85
0.59
3352--3413
19
3.0
20
84
15
83
1
17
0
80
0.79
4190--4249
31
1.9
31
93
0
102
36
15
6
41
1.73
4243--4291
6
8.0
6
78
13
55
0
22
0
77
0.77
4242--4291
18
2.7
18
84
12
66
0
24
0
76
0.80
4261--4316
26
2.2
25
87
3
76
3
26
0
69
1.04

Tables:   1

The End!