Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006930.1 Corchorus capsularis cultivar CVL-1 contig06951, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12730

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2047--2075
15
1.9
15
100
0
58
44
20
6
27
1.77
2568--2642
27
2.8
27
85
0
96
44
20
16
20
1.87
2977--3262
47
6.1
47
90
0
446
35
19
24
21
1.96
3371--3666
69
4.3
70
80
3
330
26
20
27
25
1.99
3371--3666
139
2.1
139
94
0
511
26
20
27
25
1.99
3808--3866
32
1.9
30
83
13
75
11
18
13
55
1.68
3909--3969
29
2.1
29
100
0
122
29
11
19
39
1.87
4217--4323
50
2.1
50
87
3
153
35
12
17
34
1.87
5771--5918
45
3.3
45
91
1
226
34
19
6
39
1.78
5933--5997
10
6.4
10
78
15
62
3
20
0
76
0.91
5924--5986
20
3.4
18
81
16
76
3
22
1
73
1.07
5940--5995
9
5.6
10
76
19
55
3
21
0
75
0.96
11635--11683
21
2.3
21
80
16
57
32
12
12
42
1.79

Tables:   1

The End!