Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006932.1 Corchorus capsularis cultivar CVL-1 contig06953, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15767

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
226--390
81
2.0
81
95
0
294
17
15
9
57
1.64
1978--2012
18
1.9
18
88
0
52
34
20
5
40
1.76
5050--5108
29
2.0
29
100
0
100
38
0
20
40
1.53
5315--5553
92
2.6
92
97
0
451
25
20
15
37
1.93
5543--5609
21
3.2
21
97
0
125
19
19
8
52
1.72
6954--7465
156
3.3
154
82
6
581
29
14
20
35
1.92
7816--7849
17
2.0
17
94
0
59
20
35
14
29
1.93
9002--9354
134
2.6
135
90
0
537
28
27
25
18
1.98
10652--10739
33
2.7
33
84
7
108
7
22
45
23
1.79

Tables:   1

The End!