Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006934.1 Corchorus capsularis cultivar CVL-1 contig06955, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12248

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2965--2993
15
1.9
15
100
0
58
58
6
20
13
1.58
7412--7486
30
2.5
31
86
2
107
29
17
17
36
1.93
10083--10167
35
2.5
34
85
9
111
21
9
14
55
1.67
10692--10749
16
3.7
16
86
2
73
31
29
15
24
1.95
10765--10793
15
1.9
15
100
0
58
31
27
13
27
1.94
10692--10793
16
7.0
15
72
16
72
31
31
13
23
1.93
10708--10837
57
2.3
57
90
4
208
31
33
13
20
1.92

Tables:   1

The End!