Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006937.1 Corchorus capsularis cultivar CVL-1 contig06958, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67015

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2086--2133
24
2.0
24
91
0
78
20
25
16
37
1.93
3688--3726
21
1.9
20
94
5
69
46
2
15
35
1.60
6931--7084
65
2.3
65
80
4
157
35
14
8
40
1.77
7138--7212
22
3.5
21
68
17
55
36
17
13
33
1.88
7177--7235
22
2.8
21
79
5
73
30
15
10
44
1.79
7269--7320
22
2.4
22
83
0
59
30
9
9
50
1.67
11199--11278
39
2.1
39
92
4
135
36
15
21
27
1.93
24613--24637
2
12.5
2
100
0
50
52
0
0
48
1.00
30713--30751
17
2.2
18
86
13
55
74
0
2
23
0.94
38306--38373
20
3.2
23
60
23
58
36
10
16
36
1.82
38297--38376
40
2.0
40
97
0
151
41
10
15
33
1.80
43475--43623
74
2.0
74
93
0
253
40
10
28
20
1.86
43917--43957
20
2.0
20
86
9
57
24
4
19
51
1.66
48312--48353
20
2.0
21
90
4
68
33
21
19
26
1.97
54232--54263
2
16.0
2
100
0
64
50
0
0
50
1.00
54253--54295
20
2.2
20
82
0
50
53
4
6
34
1.49
59914--59972
15
3.9
15
84
0
64
40
20
23
15
1.90

Tables:   1

The End!