Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006938.1 Corchorus capsularis cultivar CVL-1 contig06959, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23661

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5181--5252
27
2.6
28
84
4
92
25
27
13
33
1.94
9865--9912
13
3.8
13
81
10
64
66
4
29
0
1.10
9854--9907
24
2.2
25
96
3
101
64
3
29
1
1.21
13075--13129
28
2.0
28
100
0
110
27
18
21
32
1.96
15660--15704
23
1.9
23
81
4
54
33
2
33
31
1.70
15333--15751
220
1.9
221
90
3
666
35
7
21
35
1.82
15742--16349
221
2.8
220
90
2
968
36
20
7
35
1.81
16460--16550
28
3.0
30
74
22
84
68
0
15
16
1.22
16618--16689
21
3.3
21
68
24
67
63
4
23
8
1.39
16639--16713
12
6.5
12
71
20
54
64
4
28
4
1.30
16617--16720
45
2.3
45
98
0
199
62
3
25
8
1.41
21851--22074
72
3.1
72
90
0
331
14
31
25
28
1.95
22072--22252
50
3.6
50
91
0
283
20
25
23
29
1.99
22430--22599
91
1.9
90
85
3
234
38
14
12
34
1.84
23158--23661
25
20.1
25
76
5
426
6
36
31
25
1.82

Tables:   1

The End!