Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006939.1 Corchorus capsularis cultivar CVL-1 contig06960, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30977

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10--127
25
4.7
25
71
8
87
6
37
30
25
1.82
77--182
25
4.2
25
77
0
104
9
33
31
25
1.88
292--344
25
2.1
25
85
0
70
9
26
33
30
1.88
362--975
25
24.6
25
70
11
285
7
36
31
25
1.83
395--975
50
11.7
50
75
8
459
7
35
31
25
1.83
992--1037
19
2.4
19
92
0
74
8
21
50
19
1.75
2879--2956
38
2.1
37
92
2
129
33
33
11
21
1.90
3555--3625
26
2.7
26
82
6
90
18
16
26
38
1.92
6661--6979
49
6.5
49
90
0
433
24
33
14
28
1.94
24982--25015
2
17.0
2
100
0
68
50
0
0
50
1.00
25507--25558
17
3.2
17
84
10
65
44
3
0
51
1.19

Tables:   1

The End!