Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006940.1 Corchorus capsularis cultivar CVL-1 contig06961, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14688

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
153--266
22
5.2
22
74
12
99
37
21
7
33
1.82
153--266
44
2.6
44
78
9
115
37
21
7
33
1.82
302--485
22
8.3
22
75
12
108
38
17
10
33
1.84
309--483
44
4.0
42
80
7
161
37
16
10
34
1.84
356--487
66
2.0
66
83
5
169
35
16
12
35
1.86
1032--1109
38
2.1
38
90
2
122
58
11
16
12
1.62
1546--1624
31
2.5
31
83
8
88
50
3
15
30
1.61
10611--10667
1
57.0
1
78
0
60
0
0
10
89
0.49
10614--10668
5
11.0
5
86
7
67
0
0
12
87
0.55
10611--10668
25
2.3
25
91
5
91
0
0
12
87
0.53

Tables:   1

The End!