Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006941.1 Corchorus capsularis cultivar CVL-1 contig06962, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40135

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
801--855
11
5.1
11
76
12
60
61
0
1
36
1.06
2627--2694
33
2.1
33
100
0
136
42
2
17
36
1.65
2676--2796
60
2.0
60
95
0
215
34
8
23
33
1.84
7642--7773
64
2.0
66
91
4
214
22
17
24
35
1.95
12147--12208
31
2.0
32
90
3
99
45
17
11
25
1.82
24372--24447
16
4.9
16
84
9
70
47
0
19
32
1.50
24391--24442
4
12.8
4
97
2
95
50
0
23
26
1.50
26618--26692
36
2.1
36
82
5
89
34
10
4
50
1.56
28765--28792
7
4.0
7
100
0
56
42
0
57
0
0.99
30496--30525
3
10.3
3
92
7
53
33
0
0
66
0.92
30594--30621
7
4.0
7
100
0
56
28
14
28
28
1.95
31409--31439
3
10.3
3
100
0
62
0
35
0
64
0.94
39761--39803
11
3.9
11
90
0
68
46
6
4
41
1.51
39757--39803
22
2.1
22
96
0
85
46
6
4
42
1.48

Tables:   1

The End!