Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006944.1 Corchorus capsularis cultivar CVL-1 contig06965, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19326

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1742--1819
25
3.0
25
81
9
93
39
17
0
42
1.50
2318--2357
18
2.3
18
91
4
64
55
0
2
42
1.13
6826--6850
6
4.2
6
100
0
50
84
0
0
16
0.63
18478--18524
22
2.1
22
92
0
76
44
4
6
44
1.49
18478--18520
11
3.9
11
87
0
59
44
4
6
44
1.52
18738--18784
22
2.1
22
96
0
85
42
4
6
46
1.48
18738--18780
11
3.9
11
90
0
68
41
4
6
46
1.51
18397--18920
260
2.0
260
98
0
1003
39
7
19
33
1.80
19039--19074
19
1.9
18
88
5
54
69
2
0
27
1.02

Tables:   1

The End!