Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006945.1 Corchorus capsularis cultivar CVL-1 contig06966, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6620

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26--91
31
2.1
31
88
5
98
28
19
4
46
1.69
191--266
36
2.1
36
85
9
102
15
15
11
56
1.67
403--440
19
2.0
20
85
15
53
28
5
2
63
1.30
609--767
22
7.1
21
76
9
111
32
10
18
38
1.84
799--841
22
2.0
22
86
9
61
41
9
18
30
1.82
877--934
22
2.7
22
81
7
66
37
5
20
36
1.75
938--1534
22
27.8
22
67
19
139
40
8
15
35
1.79
1231--1786
44
12.8
44
68
14
230
38
10
14
36
1.80
1398--1702
22
13.7
23
71
11
120
36
10
15
38
1.81
3005--3054
25
2.0
25
88
0
73
48
10
6
36
1.61

Tables:   1

The End!