Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006946.1 Corchorus capsularis cultivar CVL-1 contig06967, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29292

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
307--332
2
13.0
2
100
0
52
50
0
0
50
1.00
556--609
23
2.4
23
81
3
74
38
18
18
24
1.93
1732--1768
16
2.2
17
90
4
58
32
43
5
18
1.73
15859--15914
24
2.4
24
91
8
89
46
8
17
26
1.78
16073--16201
69
1.9
69
98
0
249
51
2
13
32
1.53
18144--18205
27
2.3
27
97
0
115
11
29
14
45
1.80
26526--26608
2
42.0
2
97
2
159
0
49
0
50
1.00

Tables:   1

The End!