Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006957.1 Corchorus capsularis cultivar CVL-1 contig06978, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23912

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5737--5775
18
2.2
18
100
0
78
35
17
25
20
1.95
6121--6166
24
1.9
24
86
0
65
23
8
6
60
1.49
6154--6191
21
1.9
21
89
10
62
50
0
7
42
1.31
11211--11263
23
2.4
22
76
17
56
54
1
1
41
1.22
11921--11972
19
2.6
19
79
14
52
5
21
0
73
1.04
13148--13189
18
2.3
19
92
8
70
73
0
0
26
0.83
13138--13187
16
3.0
16
83
11
64
66
0
0
34
0.92
14759--14793
15
2.2
16
90
5
54
77
17
0
5
0.96
14758--14795
16
2.4
17
82
13
53
76
18
0
5
0.97
16899--16923
1
25.0
1
100
0
50
0
0
0
100
0.00
17264--17346
33
2.5
33
86
7
107
22
42
27
7
1.80
23799--23905
33
3.2
33
81
2
126
23
37
28
10
1.88

Tables:   1

The End!