Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000696.1 Corchorus capsularis cultivar CVL-1 contig00696, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2139

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
517--871
47
7.6
47
81
5
317
35
18
24
21
1.95
517--838
91
3.4
94
79
5
341
35
17
24
22
1.95
517--871
138
2.5
140
80
5
351
35
18
24
21
1.95
517--871
185
1.9
189
82
6
456
35
18
24
21
1.95
995--1212
70
3.1
70
86
5
307
31
18
26
23
1.98
1752--1849
50
2.0
50
87
4
144
36
15
13
34
1.86

Tables:   1

The End!