Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006969.1 Corchorus capsularis cultivar CVL-1 contig06990, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10872

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1673--1697
9
2.8
9
100
0
50
12
0
0
88
0.53
1778--1811
8
4.1
8
85
7
50
23
2
14
58
1.50
2718--2759
23
2.0
22
86
13
61
11
23
45
19
1.83
2727--2838
33
3.4
32
80
11
104
8
25
43
22
1.82
2837--2878
21
2.0
21
85
0
57
19
30
28
21
1.97
3431--3501
32
2.2
32
87
0
106
14
8
35
42
1.75
3431--3511
32
2.5
31
82
7
99
13
8
35
41
1.75
3649--3704
16
3.4
17
80
7
53
7
10
26
55
1.60
3649--3704
17
3.4
17
82
7
62
7
10
26
55
1.60
4391--4432
18
2.3
18
100
0
84
54
9
11
23
1.66
6345--6455
55
2.0
55
100
0
222
30
18
16
34
1.93
9900--9932
16
2.1
16
88
5
50
27
3
9
60
1.42

Tables:   1

The End!