Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006975.1 Corchorus capsularis cultivar CVL-1 contig06996, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17522

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1304--1339
18
2.0
18
88
0
54
36
11
22
30
1.89
9614--9648
16
2.2
16
89
0
52
22
2
5
68
1.24
13531--13570
21
1.9
21
84
0
53
20
25
7
47
1.75
13637--13668
14
2.4
13
94
5
55
21
18
6
53
1.67
13663--13730
26
2.6
27
81
6
68
27
19
2
50
1.62
13703--13773
32
2.2
33
85
10
92
21
19
5
53
1.65
13808--13898
40
2.3
38
75
20
96
19
25
5
49
1.70
13932--14000
36
1.9
36
87
0
102
11
23
7
57
1.58
13967--14030
16
4.1
16
68
11
53
14
23
7
54
1.65

Tables:   1

The End!