Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006977.1 Corchorus capsularis cultivar CVL-1 contig06998, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37639

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8361--8390
15
2.0
15
93
0
51
70
0
0
30
0.88
14680--15047
183
2.0
183
99
0
727
35
16
18
29
1.93
23272--23401
66
2.0
65
83
6
163
30
15
32
22
1.95
26512--26576
26
2.5
27
95
5
116
12
18
29
40
1.87
27469--27504
6
5.8
6
96
3
63
0
16
0
83
0.65
27467--27524
12
4.5
12
76
19
55
0
13
1
84
0.70
30551--30625
37
2.0
37
89
5
116
22
12
20
45
1.83

Tables:   1

The End!