Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006979.1 Corchorus capsularis cultivar CVL-1 contig07000, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55906

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1202--1237
11
3.2
11
88
7
54
66
11
0
22
1.22
1788--1835
7
7.0
7
84
13
64
60
0
0
39
0.97
19236--19530
108
2.7
109
90
5
432
37
11
1
49
1.48
20772--20816
19
2.3
19
88
3
63
31
20
24
24
1.98
27712--27759
23
2.1
23
100
0
96
50
16
12
20
1.78
31796--31851
29
2.0
27
86
13
78
30
3
23
42
1.71
33500--33584
29
2.9
29
84
3
118
16
22
27
34
1.95
36951--36988
12
3.1
13
88
7
53
15
15
34
34
1.90
40196--40543
184
1.9
184
84
7
474
29
14
23
32
1.94
53810--53840
1
31.0
1
93
0
53
0
0
96
3
0.21
54455--54535
38
2.1
39
82
13
98
48
9
9
32
1.69
54879--54909
2
15.5
2
100
0
62
51
48
0
0
1.00
54909--54950
2
21.0
2
90
0
66
45
2
2
50
1.27

Tables:   1

The End!