Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006983.1 Corchorus capsularis cultivar CVL-1 contig07004, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11931

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1435--1468
2
17.0
2
100
0
68
50
0
0
50
1.00
10609--10735
22
6.0
21
75
9
114
36
10
14
38
1.81
10610--10730
44
2.8
43
85
6
149
36
10
14
38
1.82
10608--10789
22
8.3
22
71
8
102
34
8
17
40
1.80
10826--11125
22
13.5
22
69
17
106
39
10
15
35
1.81
10990--11087
20
4.5
21
74
17
67
42
8
15
33
1.76
11069--11219
66
2.3
66
80
6
164
42
9
13
35
1.76
11092--11192
22
4.6
22
70
3
71
42
8
13
34
1.76
11300--11373
20
3.6
20
87
3
94
43
10
14
31
1.80
11300--11790
22
22.7
21
71
15
209
36
9
16
36
1.82
11319--11790
44
10.8
44
72
12
273
36
9
16
37
1.82
11319--11881
22
25.7
22
69
13
204
37
9
16
36
1.82

Tables:   1

The End!