Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006984.1 Corchorus capsularis cultivar CVL-1 contig07005, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21458

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--29
2
14.5
2
100
0
58
48
0
0
51
1.00
10680--10738
30
2.0
30
83
6
75
23
27
16
32
1.96
11080--11225
33
4.5
33
90
2
208
41
19
9
29
1.83
11215--11345
33
4.0
33
82
4
138
41
21
9
28
1.83
11211--11336
66
1.9
66
83
3
164
42
20
9
27
1.83
12826--12859
8
4.1
8
85
7
50
23
2
14
58
1.50
18140--18257
33
3.5
32
80
11
121
8
26
42
22
1.82

Tables:   1

The End!