Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006988.1 Corchorus capsularis cultivar CVL-1 contig07009, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17751

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
136--173
18
2.1
19
90
5
60
23
10
18
47
1.79
4642--4679
18
2.1
19
90
5
60
23
10
18
47
1.79
4984--5030
23
2.0
23
87
0
67
42
6
38
12
1.69
5058--5088
2
15.5
2
100
0
62
48
0
0
51
1.00
5584--5842
105
2.5
104
88
5
371
40
8
9
41
1.67
8879--8933
23
2.4
23
84
0
65
65
12
14
7
1.46
9612--9643
2
16.0
2
100
0
64
50
0
0
50
1.00
15191--15223
17
1.9
17
100
0
66
24
6
6
63
1.40
16131--16160
15
2.1
15
93
6
53
0
13
0
86
0.57

Tables:   1

The End!