Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007004.1 Corchorus capsularis cultivar CVL-1 contig07025, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12412

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5250--5274
10
2.5
10
100
0
50
56
28
0
16
1.41
5803--5872
29
2.4
30
85
2
88
37
31
12
18
1.89
6145--6208
32
2.0
32
100
0
128
25
21
28
25
1.99
6154--6260
31
3.4
31
81
3
108
20
29
25
24
1.99
6356--6430
31
2.4
31
80
4
89
21
33
21
24
1.97
6172--6510
170
2.0
169
94
1
599
27
20
21
30
1.98
12215--12239
13
1.9
13
100
0
50
48
16
24
12
1.79

Tables:   1

The End!