Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007007.1 Corchorus capsularis cultivar CVL-1 contig07028, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16861

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1351--1387
19
2.0
18
89
5
56
29
21
8
40
1.82
3471--3533
32
2.0
33
81
12
78
15
28
30
25
1.96
7645--7681
19
2.0
18
89
5
56
29
21
8
40
1.82
8082--8126
24
2.0
24
86
8
67
40
20
22
17
1.92
9110--9140
16
1.9
16
93
0
53
41
16
6
35
1.74
10165--10199
7
5.1
7
89
6
54
65
0
14
20
1.26
10174--10204
13
2.4
13
94
0
53
70
0
12
16
1.16
13233--13285
26
2.0
26
100
0
106
35
15
11
37
1.83
16815--16861
2
24.5
2
91
8
80
46
0
0
53
1.00

Tables:   1

The End!